Ahmed E. Yousef

Analytical Food Microbiology


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work are classified as BSL‐2.

      Decontamination and Waste Disposal

      Contaminated but reusable laboratory utensils and glassware should be decontaminated before cleaning. Chemical disinfection or autoclaving are often used in this case. Contaminated disposable items (e.g., disposable gloves, pipettes, and agar plates) should be placed in designated biohazard boxes with liners. Disposal of these biohazard boxes should be managed by a professional service, which may subject these items to incineration or other validated decontamination method.

      It is important that students become familiar with the personal protective equipment required for working in a microbiology laboratory as well as safety‐associated procedures and etiquette.

      Personal Protective Equipment

      Personal protective equipment (PPE) is needed to protect against physical, chemical, and biological laboratory hazards. Availability of this equipment is important but adequate training on how to use it is equally important. The following is a partial list of PPE, but others may be needed:

       Safety glasses: These should be cleaned and sanitized before and after use. Alcohol wipes may be adequate for the sanitization.

       Laboratory gowns or coats: These should be used and kept in the laboratory.

       Face masks and face shields: Masks and shields protect against splashes and aerosolized droplets and particles. These are also essential to prevent the spread of infectious airborne agents.

       Gloves: Use of disposable gloves is essential for most laboratory activities.

      Observing Personal Safety

       Appropriate attire. Wear appropriate clothing for laboratory work. Closed‐toe shoes must be worn during each laboratory period. No sandals, open‐toe shoes, or bare feet are permitted. Shorts may be disallowed.

       Winter coats and backpacks are stored away from the bench. Keep these items at a safe distance from the laboratory bench and preferably outside of the laboratory. Coat hangers, cupboards, or preferably lockers should be used to store these items temporarily while students are working in the laboratory.

       Items brought to the bench are subject to contamination; these should be kept to a minimum. Keep away all books, notebooks, calculators, laptop computers, and similar items. Technically, two sheets of paper and a pencil are all that need to be brought to the bench. One of these papers contains the laboratory exercise summary, outline, or flow chart, and other is used for recording data. It is advisable that these two sheets are kept in a transparent plastic sleeve that can be sanitized at the end of the exercise.

       Mobile phones should not be handled during the laboratory period.

       Laboratory coat. It is mandatory that a laboratory coat or similar protective covering is worn during each laboratory period. The coat must have either buttons or a zipper. The laboratory coat should be labeled with the student’s name and be kept completely buttoned or zipped for the duration of the laboratory period. After completing the work, coats should be kept in the laboratory. The instructor will point out appropriate coat storage, if available. Before coats are removed from the laboratory, they should be properly decontaminated; this can be accomplished by autoclaving.

       Eye protection. Safety goggles should be worn all the time in the laboratory.

       Washing hands. Washing hands minimizes or prevents the transfer of organisms between the analyst and the food to be analyzed and vice versa. Hands should be washed before starting any exercise (to avoid contaminating items being analyzed) and after the exercise (to prevent spreading contaminants outside the laboratory).

       Use disposable gloves. Even though disposable gloves may not be required for some experiments, it is advisable to wear these gloves for all activities in the laboratory. Analysts who have allergies to latex should wear gloves made of alternative materials (e.g., nitrile rubber). Once the work is completed, the gloves should be disposed of properly in the appropriate biohazard containers. Analysts should never leave the laboratory with gloves on. It is a sign of great carelessness when analysts are seen in hallways or elevators wearing disposable gloves. This can also be the cause of serious cross‐contamination on non‐laboratory surfaces, such as doorknobs.

       Clean and sanitize the laboratory bench. Use disinfectant and paper towels to wipe the laboratory bench both before and after any exercise. These paper towels should be disposed of in the regular trash, unless directed otherwise by the instructor.

       Never begin laboratory work without the prior permission of the laboratory instructor or supervisor. Generally, students are not allowed to work until after the instructor’s presentation on the day’s activities. If arriving early, the student may use this time to change into appropriate dress, review the exercises to be completed, inspect the laboratory for locations of needed equipment, and similar activities.

       Eating or drinking in the laboratory is forbidden. The laboratory environment is not an appropriate place for eating or drinking. In fact, any activity that might involve putting something into the mouth, (e.g., chewing gum, chewing tobacco, using a throat lozenge, smoking, habitually chewing on a pencil) may provide an opportunity for a pathogen to infect the analyst.

       Applying cosmetics in the laboratory, including lip balm or lotion, is not allowed. Anything that is applied may trap contaminants on the skin or introduce contaminants into the laboratory environment. Insertion of contact lenses is not permitted in the laboratory.

       Avoid touching eyes, skin, or hair, particularly with worn gloves. These activities can lead to body contamination with harmful microorganisms.

       Miscellaneous. Sitting on the laboratory bench is not permitted. Keep the laboratory as neat as possible at all times. At the end of each laboratory period, check and arrange all materials neatly. Return all materials to their proper places or dispose of them appropriately when your work is finished.

       Never remove equipment, media, or microbial cultures from the laboratory.

       Label all materials properly so that they can be identified easily. Tubes should be labeled using label tape and a marker. Petri dishes should be labeled on the bottom (the side with the agar) with student name, the organism, type of medium, incubation temperature, and date.

       Use pipettes carefully. Pipettes can be hazardous if not used properly. Mouth pipetting is both a poor technique and a safety hazard; therefore, it is not permitted. Pipette bulbs, manual pipette aids, and semiautomatic pipetters (with pipette tips) are available for use. Forcing a pipette into either a bulb or a pipette aid may lead to breakage and should be avoided. It should be cautioned that improper use of pipettes can lead to dripping or generation of hazardous aerosols.

       Be familiar with the available safety equipment and supplies. Know the locations of the first‐aid kit, safety showers, eyewash stations, fire extinguishers, fire blankets, and fire alarms.

       Avoid fire hazards. Hair that is shoulder length or longer must be tied back or pinned up to minimize the risk of it catching on fire. Similarly, hats with brims should be avoided as the brim might come near the flame. Hats such as baseball caps may be worn facing backward to keep the brim away from flames. For safety, constantly be aware of any burners near you. Always use your own burner. Do NOT reach across the bench to use someone else’s burner. Some of the liquids present in the laboratory are flammable; keep these away from the Bunsen burner.

       Handling fire emergencies.Students should be aware of the location of available fire safety equipment (e.g., fire extinguishers, fire blankets) and the nearest exits in case of larger fires.Alcohol fires are among the most common laboratory fires. Should a jar of alcohol catch fire, placing the lid over the jar quickly may